genewise output
Score 216.57 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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SPP00000622_2.0    2 RGYVCIITNVASKXGKTPVNYTQLAAMHVTYAEKGLRILGFPCNQFGKQ 
                     RGYVCII NVASKXGKT VNYTQLA MHV YAEKGLRI+GFPCNQFG Q 
                     RGYVCIIVNVASKXGKTKVNYTQLAEMHVNYAEKGLRIMGFPCNQFGGQ 
OMLM01021133.1-52389 agtgtaagaggtatgaaagataccggacgatggagtcaagtctactggc 
                     ggatgtttatccaggacataacatcatataacaagtgttgtcgaatgga 
                     actgccactgctaaagcaacctgagagcccttgataccgccaccgtaag 


SPP00000622_2.0   51                        EPGSEAEIKEFAKGYNAEFDLFSKID 
                                            EPG+EAEIKEFAKGYNAEFDLFSKI+ 
                                            EPGTEAEIKEFAKGYNAEFDLFSKIE 
OMLM01021133.1-52242 GTAAAAA  Intron 1   TAGgcgagggaagtgagtaggtgctaaag 
                     <0-----[52242:51901]-0>acgcacataatcagaacatattgata 
                                            aattgaatagttatcttgtccctgtg 


SPP00000622_2.0   77 VNGDAAHPLWKWMKEQPKGRGTLG                          
                     VNGD AHPLWKWMK QPKG+GTLG                          
                     VNGDDAHPLWKWMKAQPKGKGTLG           N:N[aac]       
OMLM01021133.1-51822 gaggggccctataagccagagacgAAGTGAGTT  Intron 2       
                     tagaacactgagtacacagagctg  <2-----[51748:50211]    
                     gtacttcttgggggtgcacgacga                          


SPP00000622_2.0  101     NIKWNFTK                       FLIDREGQVVKRYG 
                         NIKWNFTK                       FLIDREGQVVKRYG 
                         NIKWNFTK                       FLIDREGQVVKRYG 
OMLM01021133.1-50213 CAGCaaatataaGTAATTT  Intron 3   CAGtcagaggcggaatg 
                     -2> atagatca<0-----[50185:50063]-0>tttagagattagag 
                         ctagccag                       ttttagaagggatc 


SPP00000622_2.0  124 PMDDPSV                                           
                     P DDP V                                           
                     PTDDPRV                                           
OMLM01021133.1-50020 caggcag                                           
                     ccaacgt                                           
                     aattcga                                           


//
Making a N in phase 2 intron
>OMLM01021133.1:subseq(3146,68564).pep
RGYVCIIVNVASKXGKTKVNYTQLAEMHVNYAEKGLRIMGFPCNQFGGQEPGTEAEIKEF
AKGYNAEFDLFSKIEVNGDDAHPLWKWMKAQPKGKGTLGNNIKWNFTKFLIDREGQVVKR
YGPTDDPRV
//
>OMLM01021133.1:subseq(3146,68564).[52389:49998].sp
AGAGGCTATGTGTGCATCATAGTCAATGTGGCCTCTAAATGAGGAAAGACCAAAGTAAAC
TACACTCAGCTAGCGGAAATGCACGTCAACTATGCTGAGAAAGGTTTACGCATCATGGGC
TTCCCATGCAACCAGTTTGGAGGACAGGAACCAGGTACTGAGGCAGAAATTAAAGAGTTT
GCTAAAGGTTACAATGCTGAGTTTGACCTCTTCAGTAAGATTGAGGTGAATGGAGACGAT
GCTCACCCTCTTTGGAAGTGGATGAAGGCTCAGCCCAAAGGCAAGGGAACCCTGGGAAAC
AACATTAAATGGAACTTCACAAAGTTTCTTATTGATAGAGAGGGACAAGTGGTGAAGAGA
TATGGCCCAACAGATGATCCCAGGGTA
//
OMLM01021133.1:subseq(3146,68564)	GeneWise	match	52389	50000	216.57	-	.	OMLM01021133.1:subseq(3146,68564)-genewise-prediction-1
OMLM01021133.1:subseq(3146,68564)	GeneWise	cds	52389	52243	0.00	-	0	OMLM01021133.1:subseq(3146,68564)-genewise-prediction-1
OMLM01021133.1:subseq(3146,68564)	GeneWise	intron	52242	51901	0.00	-	.	OMLM01021133.1:subseq(3146,68564)-genewise-prediction-1
OMLM01021133.1:subseq(3146,68564)	GeneWise	cds	51900	51749	0.00	-	0	OMLM01021133.1:subseq(3146,68564)-genewise-prediction-1
OMLM01021133.1:subseq(3146,68564)	GeneWise	intron	51748	50211	0.00	-	.	OMLM01021133.1:subseq(3146,68564)-genewise-prediction-1
OMLM01021133.1:subseq(3146,68564)	GeneWise	cds	50210	50186	0.00	-	1	OMLM01021133.1:subseq(3146,68564)-genewise-prediction-1
OMLM01021133.1:subseq(3146,68564)	GeneWise	intron	50185	50063	0.00	-	.	OMLM01021133.1:subseq(3146,68564)-genewise-prediction-1
OMLM01021133.1:subseq(3146,68564)	GeneWise	cds	50062	50000	0.00	-	0	OMLM01021133.1:subseq(3146,68564)-genewise-prediction-1
//